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  • Y. Wang, F. Baumdicker, F. Staubach (2020+) Strain variants of closely related gluconobacter in the fly microbiome determine host fitness,

  • J. Adrion et al. (2020) A community-maintained standard library of population genetic models. eLife 2020;9:e54967, (view paper)
  • F. Baumdicker, E. Huss, P. Pfaffelhuber (2020) Modifiers of mutation rate in selectively fluctuating environments. Stochastic Processes and their Applications, (view paper) (view arxiv preprint)

  • P. Pfaffelhuber, F. Grundner-Culemann, V. Lipphardt, F. Baumdicker (2020) How to choose sets of ancestry informative markers: A supervised feature selection approach. Forensic Science International: Genetics, (view article)(view biorxiv preprint)

  • F. Baumdicker, U. Hölker (2020) Method comparison with repeated measurements - Passing-Bablok regression for grouped data with errors in both variables. Statistics & Probability Letters, (view article)(view arxiv preprint)

  • F. Baumdicker, A. M. I. Huebner, and P. Pfaffelhuber (2018) The ordered independent loss model for the evolution of CRISPR spacers. Theoretical Population Biology, 119, 72-82 , (view pdf) (view arxiv preprint)

  • W. Ding, F. Baumdicker, and R. A. Neher (2018) panX: pan-genome analysis and exploration. Nucleic Acids Research, 46, 1, e5, (view pdf) (view biorxiv preprint)

  • F. Baumdicker (2015). The site frequency spectrum of dispensable genes. Theoretical Population Biology, 100, 13-25. (view pdf)

  • F. Baumdicker (2014). Bacterial Population Genomics - towards a population genetics view of bacterial evolution, Dissertation (view pdf)

  • F. Baumdicker and P. Pfaffelhuber (2014). The infinitely many genes model with horizontal gene transfer, Electronic Journal of Probability 19 (view pdf)

  • Baumdicker F., W. R. Hess, and P. Pfaffelhuber (2012). The infinitely many genes model for the distributed genome of bacteria, Genome Biology and Evolution 2012 (view pdf)

  • F. Baumdicker and P. Pfaffelhuber (2011). Evolution of bacterial genomes under horizontal gene transfer, arXiv:1105.5014v1 [q-bio.PE] (view pdf)

  • Baumdicker, F., W. R. Hess, and P. Pfaffelhuber (2010). The diversity of a distributed genome in bacterial populations, Annals of Applied Probability 20 (5), 1567-1606. (view pdf)